Browse by Committee Member

MacKrell, Elliot James (2025) Global Analysis of Protein Synthesis and Degradation in Escherichia coli. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/n97w-ch36. https://resolver.caltech.edu/CaltechTHESIS:06292024-034255793

Buss, Marjorie Theresa (2024) Tools for Noninvasive Imaging and Control of Engineered Bacteria In Vivo. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/mvgg-ch02. https://resolver.caltech.edu/CaltechTHESIS:05292024-221307093

Porter, Michael Koizumi (2024) Improvement of Microbial Detection and Analysis Techniques in Complex Biological Environments. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/7chb-wk98. https://resolver.caltech.edu/CaltechTHESIS:05292024-020036252

Gorin, Gennady (2023) Stochastic Foundations for Single-Cell RNA Sequencing. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/jn6n-x368. https://resolver.caltech.edu/CaltechTHESIS:06022023-194724728

Husic, Corey Christopher (2023) Strategies for the Mechanically Triggered Release of Small Molecules. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/0add-6n09. https://resolver.caltech.edu/CaltechTHESIS:04242023-215416950

Liaw, Eric Jer-Jiun (2023) A Novel, Rapid Phenotypic Assay for a Beta-Lactam Antibiotic Susceptibility and an Analysis of its Theoretical Limits. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/qhvg-7q92. https://resolver.caltech.edu/CaltechTHESIS:05112023-130637882

Ling, Bill (2023) Acoustic Biomolecules for Diagnostic Ultrasound Imaging. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/va8g-tb47. https://resolver.caltech.edu/CaltechTHESIS:05312023-220301021

Liu, Xinyan (2023) Bioorthogonal Noncanonical Amino Acid Tagging for Understanding Bacterial Persistence. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/q6bx-kt39. https://resolver.caltech.edu/CaltechTHESIS:08272022-063655097

Arrastia, Mary Villanueva (2022) Development of Single-Cell SPRITE: a Tool for Measuring Heterogeneity of 3D DNA Organization. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/w70x-2294. https://resolver.caltech.edu/CaltechTHESIS:10012021-223453672

Barlow, Jacob T. (2022) Quantitative Sequencing and its Application to Studies of the Human Small-Intestine Microbiota. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/ca28-fk21. https://resolver.caltech.edu/CaltechTHESIS:10282021-191743624

Savela, Emily Sue (2022) Nucleic Acid Measurements for Antibiotic Susceptibility Testing and Early Detection of SARS-CoV-2. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/vp9a-n206. https://resolver.caltech.edu/CaltechTHESIS:10072021-173853251

Watkins-Dulaney, Ella Jenná (2022) Engineering the Tryptophan Synthase β-Subunit for Synthesis of Noncanonical Amino Acids. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/yekm-y267. https://resolver.caltech.edu/CaltechTHESIS:07062021-155047044

Williams, Rory Logan (2022) Development and Scaling of Differentiation Circuit Architectures for Improving the Evolutionary Stability of Burdensome Functions in E. coli. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/5k67-b636. https://resolver.caltech.edu/CaltechTHESIS:01042022-184525578

Ylitalo, Andrew Samuel (2022) A Bubble Is Born: Nucleation and Early Growth of CO₂ Bubbles in Polymer Foams. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/cdgw-7c18. https://resolver.caltech.edu/CaltechTHESIS:03222022-221436705

Eng, Chee Huat (Linus) (2021) Plus Ultra: Genome-Wide Spatial Transcriptomics with RNA seqFISH+. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/nvfe-5j74. https://resolver.caltech.edu/CaltechTHESIS:05302021-051953086

McCardell, Reed Dillard (2021) Genetic Circuits for the Control of Multi-Strain Bacterial Populations. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/wgpp-vj97. https://resolver.caltech.edu/CaltechTHESIS:05082021-185615529

Perry, Elena Kim (2021) Mechanisms and Consequences of Bacterial Resistance to Natural Antibiotics. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/tv8n-kr43. https://resolver.caltech.edu/CaltechTHESIS:04152021-173245433

Poceviciute, Roberta (2021) Mucosal Landscape of the Gut: Development and Application of 3D Imaging Tools for Interrogation of Host-Microbe Mucosal Interface in Mice and Humans. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/83t8-mv42. https://resolver.caltech.edu/CaltechTHESIS:09012020-121925511

Bedrossian, Manuel M. (2020) A Novel Digital Holographic Microscope (DHM) to Investigate and Characterize Microbial Motility in Extreme Aquatic Environments. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/m3a3-4610. https://resolver.caltech.edu/CaltechTHESIS:04272020-152058259

Bogatyrev, Said R. (2020) Development of Analytical Tools and Animal Models for Studies of Small-Intestine Dysbiosis. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/VJDZ-7B52. http://resolver.caltech.edu/CaltechTHESIS:10012019-095132591

Jue, Erik Bradley (2020) Improved Tools for Point-of-Care Nucleic Acid Amplification Testing. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/d6mf-5081. https://resolver.caltech.edu/CaltechTHESIS:05292020-131840076

Liu, Xinran (2020) Cell-Selective Proteomic Profiling in Complex Biological Systems. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/p18t-5j69. https://resolver.caltech.edu/CaltechTHESIS:05282020-112303076

Porubsky, Nicholas James (2020) Enhanced Algorithms for Analysis and Design of Nucleic Acid Reaction Pathways. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/M8CZ-MW98. https://resolver.caltech.edu/CaltechTHESIS:10062019-213347699

Silverman, Bradley Ross (2020) Protein-Mediated Colloidal Assembly. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/x3ya-fq67. https://resolver.caltech.edu/CaltechTHESIS:05302020-111741817

Zhukov, Dmitriy Vladimirovich (2020) Facilitating Miniaturized Bioanalytical Assays in Microfluidic Devices. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/x9wq-h920. https://resolver.caltech.edu/CaltechTHESIS:02062020-145031701

Khazaei, Tahmineh (2019) Metabolic Bi-Stability and Hysteresis in a Model Microbiome Community. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z588-5H60. https://resolver.caltech.edu/CaltechTHESIS:05312019-135625690

Preska Steinberg, Asher Raphael (2019) How Polymers Shape the Physicochemical Environment of the Gut. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/XPEZ-G864. https://resolver.caltech.edu/CaltechTHESIS:04162019-155405091

Ramachandran, Karthik (2019) Bioresorbable Vascular Scaffolds Gain Ductility, Resistance to Hydrolysis, and Radial Strength via a Unique Poly L-lactide Microstructure. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/9146-5159. https://resolver.caltech.edu/CaltechTHESIS:11162018-140640407

Rolando, Justin Charles (2019) Bioanalytical Tools to Develop Rapid Diagnostics and Study Physiology. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/99NT-WP75. https://resolver.caltech.edu/CaltechTHESIS:05292019-112017023

Schoepp, Nathan Garrett (2019) Phenotypic Antimicrobial Susceptibility Testing Based on Nucleic Acid Analysis. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/5F6B-F452. https://resolver.caltech.edu/CaltechTHESIS:05302019-162535966

Zhang, Yandong (2019) Highly Multiplexed Imaging of E. Coli Chromosome and Sensitive Detection of Single-Cell Protein. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/CDSX-MR28. https://resolver.caltech.edu/CaltechTHESIS:06072019-153337463

Schlappi, Travis Stratton (2018) Improving the Speed and Performance of Point-of-Care Diagnostics with Microfluidics. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9K935Q6. https://resolver.caltech.edu/CaltechTHESIS:08292017-182342238

Griffin, Matthew Everett (2017) Discovering Biological Roles of Glycosaminoglycans and Protein O-GlcNAcylation Using Chemical Tools. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9610XCH. https://resolver.caltech.edu/CaltechTHESIS:06042017-183300784

Selck, David Anthony (2017) Microfluidics for Molecular Measurements and Quantitative Distributable Diagnostics. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9ZC80XT. https://resolver.caltech.edu/CaltechTHESIS:07292016-195927111

Babin, Brett Michael (2016) Bioorthogonal Noncanonical Amino Acid Tagging for Selective Analysis of the Pseudomonas aeruginosa Proteome. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z94X55S1. https://resolver.caltech.edu/CaltechTHESIS:05062016-131543245

Thomas, Daniel Aaron (2016) Chemical Reaction Dynamics of the Liquid/Vapor Interface Studied by Mass Spectrometry. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9SN06XG. https://resolver.caltech.edu/CaltechTHESIS:05182016-140524270

Han, Chao (2015) Wide Field-of-View Microscopes and Endoscopes for Time-Lapse Imaging and High-Throughput Screening. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9SF2T49. https://resolver.caltech.edu/CaltechTHESIS:01302015-101318815

Lee, Seung Ah (2014) Bright-Field and Fluorescence Chip-Scale Microscopy for Biological Imaging. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/HNWJ-J182. https://resolver.caltech.edu/CaltechTHESIS:02212014-174719213

Sun, Bing (2014) Mechanistic Studies of Reactions at the Single-Molecule Level using Microfluidics with Applications in Molecular Diagnostics. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/BT81-YX06. https://resolver.caltech.edu/CaltechTHESIS:05052014-142031176

Truong, Frank (2013) Expanding Protein Sequence Space through Incorporation of Non-Canonical Amino Acids. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/6CXB-2092. https://resolver.caltech.edu/CaltechTHESIS:02182013-221231959