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Number of items: 78.

2021

Banerjee, Abhik Kumar (2021) Diverse Roles of RNA-protein Interactions: From Viral Antagonism to Mammalian Development. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/tfb9-n887. https://resolver.caltech.edu/CaltechTHESIS:02032021-180657616

2020

Bogatyrev, Said R. (2020) Development of Analytical Tools and Animal Models for Studies of Small-Intestine Dysbiosis. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/VJDZ-7B52. http://resolver.caltech.edu/CaltechTHESIS:10012019-095132591

Chure, Griffin Daniel (2020) The Molecular Biophysics of Evolutionary and Physiological Adaptation. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/q8h6-xr92. https://resolver.caltech.edu/CaltechTHESIS:06022020-102020436

Hanewich-Hollatz, Mikhail Henning (2020) Conditional Guide RNAs: Programmable Conditional Regulation of CRISPR/Cas Function via Dynamic RNA Nanotechnology. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/NS2B-DJ96. https://resolver.caltech.edu/CaltechTHESIS:11042019-135312842

Silverman, Bradley Ross (2020) Protein-Mediated Colloidal Assembly. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/x3ya-fq67. https://resolver.caltech.edu/CaltechTHESIS:05302020-111741817

2019

Frankiw, Luke Steven (2019) mRNA Splicing-Mediated Gene Expression Regulation in Innate Immunity. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/NBQG-BS67. https://resolver.caltech.edu/CaltechTHESIS:06052019-122355847

Frick, Christopher Lee (2019) How Single Cells Sense Smad3 Signal. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/WNM4-4R58. https://resolver.caltech.edu/CaltechTHESIS:05222019-160829503

Kim, Kibeom (2019) Memory and Decoding in Signaling Transduction Pathways. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/BJDQ-JX45. https://resolver.caltech.edu/CaltechTHESIS:06092019-220453694

Nunns, Harry James Rogan (2019) Linearity in Cell Signaling Pathways. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/WP0J-E945. https://resolver.caltech.edu/CaltechTHESIS:01222019-133152032

Shao, Zixuan (2019) Biological Responses to Therapeutic Treatments of Human Vascular Diseases. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/P2S4-AY40. https://resolver.caltech.edu/CaltechTHESIS:05302019-145256322

Shih, Pei-Yin (2019) The Ethology of Stress in Nematodes. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/1E7G-K373. https://resolver.caltech.edu/CaltechTHESIS:01062019-215120039

2018

Barnes, Stephanie Loos (2018) Decoding the Regulatory Genome: Quantitative Analysis of Transcriptional Regulation in Escherichia coli. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/D13T-7868. https://resolver.caltech.edu/CaltechTHESIS:05292018-133205686

Belliveau, Nathan Maurice (2018) Quantitative Dissection of the Allosteric and Sequence-Dependent Regulatory Genome in E. coli. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9DN438T. https://resolver.caltech.edu/CaltechTHESIS:01052018-221609680

Chen, Chun-Kan (2018) Revealing the Mechanism of Xist-mediated Silencing. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z94J0C9J. https://resolver.caltech.edu/CaltechTHESIS:11032017-102218314

Nandagopal, Nagarajan (2018) New Capabilities of the Notch Signaling Pathway. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z98050TB. https://resolver.caltech.edu/CaltechTHESIS:12282017-140713708

Park, Jin (2018) Circuits of Dynamically Interacting Sigma Factors in Single Cells. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/CT0B-Q853. https://resolver.caltech.edu/CaltechTHESIS:12312017-234413682

Swaminathan, Anandh (2018) Application, Computation, and Theory for Synthetic Gene Circuits. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9833Q67. https://resolver.caltech.edu/CaltechTHESIS:12132017-121914940

2017

Fisher-Aylor, Katherine Irene (2017) Chromatin Topology and Transcription in Myogenesis. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9K07290. https://resolver.caltech.edu/CaltechTHESIS:09302016-110627143

Guo, Shaobin (2017) Prototyping Diverse Synthetic Biological Circuits in a Cell-Free Transcription-Translation System. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9CR5RDK. https://resolver.caltech.edu/CaltechTHESIS:03082017-163613964

Kim, Jinho (2017) Compact Microscope System for Biomedical Applications. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9H9937R. https://resolver.caltech.edu/CaltechTHESIS:04262017-114441886

Shah, Sheel Mukesh (2017) Highly Multiplexed Single Cell In Situ RNA Detection. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9X63JXH. https://resolver.caltech.edu/CaltechTHESIS:12152016-144548062

2016

Acharya, Aneesh (2016) Multiplexed Analysis of Diverse RNA Classes via Hybridization Chain Reaction. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z95M63N0. https://resolver.caltech.edu/CaltechTHESIS:06032016-143422651

Hsiao, Victoria (2016) Synthetic Circuits for Feedback and Detection in Bacteria. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9WD3XJW. https://resolver.caltech.edu/CaltechTHESIS:05082016-170628018

Lubeck, Eric (2016) Towards in situ Single Cell Systems Biology. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9BK1999. https://resolver.caltech.edu/CaltechTHESIS:02262016-115004310

Rios, Gustavo (2016) Nanofabricated Neural Probe System for Dense 3-D Recordings of Brain Activity. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9BG2M0B. https://resolver.caltech.edu/CaltechTHESIS:05172016-133516099

Sun, Zachary Zhipeng (2016) An in vitro Biomolecular Breadboard for Prototyping Synthetic Biological Circuits. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9TB14TW. https://resolver.caltech.edu/CaltechTHESIS:10012015-221355676

2015

Cornejo de los Santos, Emmanuel Lorenzo (2015) Expanding the Toolkit for Synthetic Biology: Frameworks for Native-like Non-natural Gene Circuits. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9M61H64. https://resolver.caltech.edu/CaltechTHESIS:05182015-163708506

Goldberg, Mark David (2015) Development of Microfluidic Devices with the Use of Nanotechnology to Aid in the Analysis of Biological Systems Including Membrane Protein Separation, Single Cell Analysis, and Genetic Markers. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9P848V6. https://resolver.caltech.edu/CaltechTHESIS:06022015-150554177

Hoenselaar, Andreas (2015) The Structure of Hippocampal Activity During REM Sleep. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z98W3B8H. https://resolver.caltech.edu/CaltechTHESIS:11172014-000718184

Mahdavi, Alborz (2015) Synthetic Biology Tools for Targeted Incorporation of Non-Canonical Amino Acids into Cellular Proteins. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9W66HS4. https://resolver.caltech.edu/CaltechTHESIS:12052014-154140797

Singer, Zakary Sean (2015) Metastability and Dynamics of Stem Cells: From Direct Observations to Inference at the Single Cell Level. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9ST7MS1. https://resolver.caltech.edu/CaltechTHESIS:05262015-152206802

Srinivas, Niranjan (2015) Programming Chemical Kinetics: Engineering Dynamic Reaction Networks with DNA Strand Displacement. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9KD1VVJ. https://resolver.caltech.edu/CaltechTHESIS:06012015-171243593

Yong, John (2015) Dynamics and Heterogeneity of Gene Expression and Epigenetic Regulation at the Single-Cell Level. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9ZC80VX. https://resolver.caltech.edu/CaltechTHESIS:04292015-153123844

2014

Inagaki, Hidehiko K. (2014) Neuronal Mechanism of State Control in Drosophila melanogaster. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/MPZX-TN59. https://resolver.caltech.edu/CaltechTHESIS:02112014-133121063

Jones, Daniel Lawson III (2014) Sequence-Function Relationships in E. coli Transcriptional Regulation. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/4J7V-WD59. https://resolver.caltech.edu/CaltechTHESIS:06022014-165211576

Lakhanpal, Amit (2014) Experimental and Theoretical Studies of Notch Signaling-Mediated Spatial Pattern. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/RGPT-RS80. https://resolver.caltech.edu/CaltechTHESIS:10312013-102814054

LeBon, Lauren E. (2014) The Logic of Receptor-Ligand Interactions in the Notch Signaling Pathway. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/83PA-9833. https://resolver.caltech.edu/CaltechTHESIS:05212014-094412950

Loson, Oliver Calvin (2014) Regulation of Mitochondrial Division by the Drp1 Receptors. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/J23G-KQ18. https://resolver.caltech.edu/CaltechTHESIS:05072014-160207088

Tan, Frederick Eng How (2014) Brfl Post-Transcriptionally Regulates Pluripotency and Differentiation Responses Downstream of Erk MAP Kinase. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/MM53-XC23. https://resolver.caltech.edu/CaltechTHESIS:05292014-234047875

2013

Bower, Danielle Vera Brown (2013) Chemical and Neural Regulation of Embryonic Branching Morphogenesis. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9SX6B6R. https://resolver.caltech.edu/CaltechTHESIS:05302013-135915010

Sternberg, Jonathan Ben-Zion (2013) Signal Transduction with Hybridization Chain Reactions. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z90Z719Z. https://resolver.caltech.edu/CaltechTHESIS:06072013-170244348

Venturelli, Ophelia Shalini (2013) Role of Feedback and Dynamics of a Gene Regulatory Network. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/WGK3-Y839. https://resolver.caltech.edu/CaltechTHESIS:06072013-095239958

Zheng, Guoan (2013) Innovations in Imaging System Design: Gigapixel, Chip-Scale and MultiFunctional Microscopy. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/SF6E-S775. https://resolver.caltech.edu/CaltechTHESIS:10102012-101657790

2012

Ford, William Chastang (2012) I. Quantal Effects in Biochemical Cooperativity and a Proposed Mechanism for the Differentiation of Calcium Signaling in Synaptic Plasticity. II. Evolutionary Algorithms for the Optimization of Methods in Computational Chemistry. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9HH6H1Z. https://resolver.caltech.edu/CaltechTHESIS:05302012-122930768

Galloway, Kate Elizabeth (2012) The Development of RNA-based Control Systems to Regulate Signaling and Dictate Cell Fate in a Model MAPK Pathway. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/CBBN-GX03. https://resolver.caltech.edu/CaltechTHESIS:06072012-150636005

Levine, Joseph H. (2012) Genetic Regulatory Circuit Dynamics: Analysis and Synthesis. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/35A7-K421. https://resolver.caltech.edu/CaltechTHESIS:06052012-121432503

Young, Jonathan Wan (2012) Architecture, Dynamics, and Function of the General Stress Response System in B. subtilis. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/93MF-Q808. https://resolver.caltech.edu/CaltechTHESIS:05292012-120719001

2011

Garcia, Hernan G. (2011) Transcriptional Regulation by the Numbers. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/63RG-8P84. https://resolver.caltech.edu/CaltechTHESIS:12162010-123122193

Hariadi, Rizal Fajar (2011) Non-Equilibrium Dynamics of DNA Nanotubes. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/6GQW-YG26. https://resolver.caltech.edu/CaltechTHESIS:06062011-122322347

Kuntz, Steven Gregory (2011) hlh-1 and the C. elegans Body Wall Muscle Transcriptional Differentiation Network. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/18XS-YM65. https://resolver.caltech.edu/CaltechTHESIS:10212010-102536869

Schaedel, Oren Noah (2011) Dynamic Regulation of the Dauer Decision. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/JZ9E-AD68. https://resolver.caltech.edu/CaltechTHESIS:04272011-021639361

Sen, Shaunak (2011) Regulatory Consequences of Bandpass Feedback in a Bacterial Phosphorelay. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/NPZD-G382. https://resolver.caltech.edu/CaltechTHESIS:05252011-222115269

Ward, Catherine Marie (2011) Medea Selfish Genetic Elements as Tools for Altering Traits of Wild Populations: A Theoretical Analysis. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/T656-ZN91. https://resolver.caltech.edu/CaltechTHESIS:05312011-123357339

2010

Choi, Harry Ming Tak (2010) Programmable In Situ Amplification for Multiplexed Bioimaging. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/K4A3-1K41. https://resolver.caltech.edu/CaltechTHESIS:12292009-170615072

Dalal, Chiraj Kiran (2010) Causes and Consequences of Gene Expression Noise. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/MHSR-9875. https://resolver.caltech.edu/CaltechTHESIS:03312010-150904525

Gu, Ming (2010) Interactions Between Hippocampal Areas CA3 and CA1 During Slow-Wave Sleep. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9BV7DMM. https://resolver.caltech.edu/CaltechTHESIS:03102010-232405639

2009

Axelrod, Blake Waters (2009) Single Cell Pico Force Microscopy: A Novel Tool for High Resolution Measurement of Cell Forces. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/ESGS-Z942. https://resolver.caltech.edu/CaltechETD:etd-04082009-102110

Bayer, Travis Scott (2009) Synthetic Regulation and Genetic Control of an Ecological Strategy. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/3GDB-C409. https://resolver.caltech.edu/CaltechETD:etd-10162008-131654

Brenner, Sarah Katherine (2009) Engineering Synthetic Biofilm-Forming Microbial Consortia. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/PMZ3-4Z96. https://resolver.caltech.edu/CaltechETD:etd-04212009-104756

Gordon, Sean Patrick (2009) Hormone and Gene Feedback during Development and Regeneration in Arabidopsis thaliana. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/T3CR-TC54. https://resolver.caltech.edu/CaltechETD:etd-05022009-103703

Ursell, Tristan Scott (2009) Stretching the Definition of a Lipid Bilayer: Elasticity's Role in Protein and Lipid Organization. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Q0R5-K353. https://resolver.caltech.edu/CaltechETD:etd-06062009-131454

2008

Cox, Robert Sidney, III (2008) Transcriptional Regulation and Combinatorial Genetic Logic in Synthetic Bacterial Circuits. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/KRW6-DH88. https://resolver.caltech.edu/CaltechETD:etd-03042008-130011

Dunlop, Mary Julia (2008) Dynamics and Correlated Noise in Gene Regulation. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/AC8V-6S05. https://resolver.caltech.edu/CaltechETD:etd-05302008-141602

Han, Lin (2008) In vitro DNA Mechanics in Gene Regulation: One Molecule at a Time. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/7573-A922. https://resolver.caltech.edu/CaltechETD:etd-01282008-150852

Lee, Wonhee (2008) Microfluidic Chip Calorimeters for Biological Applications. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/W8E0-4W22. https://resolver.caltech.edu/CaltechETD:etd-05282008-103138

Maerkl, Sebastian Josef (2008) Microfluidic Large Scale Integration and its Application to Systems Biology. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/5CMX-CV08. https://resolver.caltech.edu/CaltechETD:etd-05222007-141119

Mattson, Matthew Sanford (2008) Understanding and Treating Eye Diseases: Mechanical Characterization and Photochemical Modification of the Cornea and Sclera. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/DXGR-GV57. https://resolver.caltech.edu/CaltechETD:etd-05282008-163501

2007

Balagaddé, Frederick Kiguli (2007) Microfluidic Technologies for Continuous Culture and Genetic Circuit Characterization. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/NJ5Z-XV43. https://resolver.caltech.edu/CaltechETD:etd-06112007-102627

Bao, Xiaoyan Robert (2007) Lost in a Crowd: Observations of Single DNA Knots and Single Mammalian Cells. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/F2XV-MC44. https://resolver.caltech.edu/CaltechETD:etd-04062007-163445

Kim, Jongmin (2007) In Vitro Synthetic Transcriptional Networks. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Q9YA-N192. https://resolver.caltech.edu/CaltechETD:etd-12182006-115817

Murphy, Gavin Erick (2007) Cryoelectron Tomography of Bacteria and their Macromolecular Machines. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/517B-0Z68. https://resolver.caltech.edu/CaltechETD:etd-05212007-162731

2006

Collins, Cynthia Hollie (2006) Directed Evolution of the Transcriptional Activator LuxR. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/61qd-8j79. https://resolver.caltech.edu/CaltechETD:etd-12272005-160649

Drummond, David Allan (2006) Misfolding Dominates Protein Evolution. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/DH8E-2N10. https://resolver.caltech.edu/CaltechETD:etd-06022006-154329

Kulkarni, Rajan P. (2006) Mechanics of the Cytoskeleton: Examining the Dynamics of Cytoplasmic Transport through Fluorescence Microscopy. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/85ea-ed40. https://resolver.caltech.edu/CaltechETD:etd-03112006-214258

Lacenere, Christopher J. (2006) Advances in Single Molecule Nucleic Acid Sequencing. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/CA4B-S389. https://resolver.caltech.edu/CaltechETD:etd-09302006-140602

Vyawahare, Saurabh (2006) Manipulating Fluids: Advances in Micro-Fluidics, Opto-Fluidics and Fluidic Self-Assembly. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/04XY-C430. https://resolver.caltech.edu/CaltechETD:etd-05252006-223101

2004

Hansen, Carl Lars Genghis (2004) Microfluidic Technologies for Structural Biology. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/N9T3-7114. https://resolver.caltech.edu/CaltechETD:etd-06012004-144201

Kartalov, Emil Paskalev (2004) Single-Molecule Detection and DNA Sequencing-by-Synthesis. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/50YQ-0S81. https://resolver.caltech.edu/CaltechETD:etd-05142004-100932

This list was generated on Sat Apr 17 02:02:19 2021 UTC.