Browse by Committee Member

Chen, Xiaoqiao (2025) Active Acquisition Methods for Single Cell Genomics. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/nsn8-nd79. https://resolver.caltech.edu/CaltechTHESIS:07052024-170119371

Wang, Zitong (Jerry) (2025) Theoretical and Computational Analysis of Cell Migration in Complex Tissue Environments. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/mj08-b258. https://resolver.caltech.edu/CaltechTHESIS:06152024-132652470

Schwartz, Morgan Sarah (2024) Accelerating Biological Discovery with Deep Learning and Spatial Optical Barcodes. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/55c7-8142. https://resolver.caltech.edu/CaltechTHESIS:05282024-221603734

Liaw, Eric Jer-Jiun (2023) A Novel, Rapid Phenotypic Assay for a Beta-Lactam Antibiotic Susceptibility and an Analysis of its Theoretical Limits. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/qhvg-7q92. https://resolver.caltech.edu/CaltechTHESIS:05112023-130637882

Arrastia, Mary Villanueva (2022) Development of Single-Cell SPRITE: a Tool for Measuring Heterogeneity of 3D DNA Organization. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/w70x-2294. https://resolver.caltech.edu/CaltechTHESIS:10012021-223453672

Barlow, Jacob T. (2022) Quantitative Sequencing and its Application to Studies of the Human Small-Intestine Microbiota. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/ca28-fk21. https://resolver.caltech.edu/CaltechTHESIS:10282021-191743624

Edmonds, KeHuan Kuo (2022) Imaging Cell Lineage with a Synthetic Digital Recording System. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/a4m3-m603. https://resolver.caltech.edu/CaltechTHESIS:11272021-193744399

Eng, Chee Huat (Linus) (2021) Plus Ultra: Genome-Wide Spatial Transcriptomics with RNA seqFISH+. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/nvfe-5j74. https://resolver.caltech.edu/CaltechTHESIS:05302021-051953086

Takei, Yodai (2021) Integrated Spatial Genomics Reveals Organizational Principles of Single-Cell Nuclear Architecture. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/4ces-zm75. https://resolver.caltech.edu/CaltechTHESIS:06022021-012404326

Zhou, Wen (2021) Single-Cell Analysis of Normal and Perturbed Early T-Cell Developmental Processes. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/733t-mg82. https://resolver.caltech.edu/CaltechTHESIS:01292021-130102777

Zhang, Yandong (2019) Highly Multiplexed Imaging of E. Coli Chromosome and Sensitive Detection of Single-Cell Protein. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/CDSX-MR28. https://resolver.caltech.edu/CaltechTHESIS:06072019-153337463

Davis, Matthew Robert (2018) Computational Studies of Noncovalent Interactions in Ligand-Gated Ion Channels – and - Synthesis and Characterization of Red and Near Infrared Cyanine Dyes. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9XK8CQF. https://resolver.caltech.edu/CaltechTHESIS:08182017-161833257

Letsou, William Peter (2018) Noncommutative Biology: Sequential Regulation of Complex Networks and Connected Matter. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/9B5E-F105. https://resolver.caltech.edu/CaltechTHESIS:05292018-192944407

Stone, Shannon Elizabeth (2018) Cell-Selective Chemoproteomics for Biological Discovery. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9V122ZF. https://resolver.caltech.edu/CaltechTHESIS:07222017-155020423

Chan, Ken Yee (2017) Engineered Viral Vectors and Developed Tissue Clearing Methods for Single-cell Phenotyping in Whole Organs. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9NC5Z7H. https://resolver.caltech.edu/CaltechTHESIS:05302017-222932176

Mertens, Laura Anna (2017) Experiments on Gas Phase Chemistry with High Sensitivity Laser Spectroscopy. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z95X26XD. https://resolver.caltech.edu/CaltechTHESIS:10172016-103350209

Selck, David Anthony (2017) Microfluidics for Molecular Measurements and Quantitative Distributable Diagnostics. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9ZC80XT. https://resolver.caltech.edu/CaltechTHESIS:07292016-195927111

Shah, Sheel Mukesh (2017) Highly Multiplexed Single Cell In Situ RNA Detection. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9X63JXH. https://resolver.caltech.edu/CaltechTHESIS:12152016-144548062

Zhou, Edward Haojiang (2017) Optical Focusing and Imaging through Scattering Media. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9TX3CD1. https://resolver.caltech.edu/CaltechTHESIS:05172017-103505376

Husain, Naeem Shahab (2016) Mapping mRNA and Protein Expression with High Signal-to-Background in Diverse Organisms. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9DF6P73. https://resolver.caltech.edu/CaltechTHESIS:02252016-123239637

Lubeck, Eric (2016) Towards in situ Single Cell Systems Biology. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9BK1999. https://resolver.caltech.edu/CaltechTHESIS:02262016-115004310

Ou, Xiaoze (2016) Computational Microscopy: Breaking the Limit of Conventional Optics. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9M32SRZ. https://resolver.caltech.edu/CaltechTHESIS:04282016-051723211

Perez, Kathryn A. (2016) Structural and Biochemical Characterization of Ligand Bound States of the FeMo-Cofactor of Nitrogenase. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9M043DX. https://resolver.caltech.edu/CaltechTHESIS:05262016-050606547

Segal, Helen Muriel (2016) Electrochemical Methods to Study Iron-Sulfur Cluster Proteins. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z92Z13HT. https://resolver.caltech.edu/CaltechTHESIS:05252016-131059745

Bui, Thinh Quoc (2015) Cavity Enhanced Spectroscopies for Applications of Remote Sensing, Chemical Kinetics and Detection of Radical Species. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z96D5QXW. https://resolver.caltech.edu/CaltechTHESIS:06032015-151007228

Chen, Yi-Ju (2015) The Mechanical Genome in Regulation and Infection. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9PC308X. https://resolver.caltech.edu/CaltechTHESIS:05072015-162723691

Singer, Zakary Sean (2015) Metastability and Dynamics of Stem Cells: From Direct Observations to Inference at the Single Cell Level. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9ST7MS1. https://resolver.caltech.edu/CaltechTHESIS:05262015-152206802

Lovely, Geoffrey A. (2014) Biophysics of V(D)J Recombination and Genome Packaging: In Singulo Studies on RAG, HMGB1, and TFAM. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9W9573H. https://resolver.caltech.edu/CaltechTHESIS:06072014-140700155

Minor, Paul Joseph (2014) Wnt and FGF Signaling in C. elegans Vulval Cell Lineage Polarity. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/99ZE-5Y87. https://resolver.caltech.edu/CaltechTHESIS:08142013-092554646

Sun, Bing (2014) Mechanistic Studies of Reactions at the Single-Molecule Level using Microfluidics with Applications in Molecular Diagnostics. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/BT81-YX06. https://resolver.caltech.edu/CaltechTHESIS:05052014-142031176

Hwang, Kiwook (2013) Biotechnologies for Cancer Diagnostics: Cell Sorting, Protein Analysis and Imaging of Cellular Metabolism. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z6DN-0483. https://resolver.caltech.edu/CaltechTHESIS:06072013-111912342

Nag, Arundhati (2013) Developing Peptide Based Capture Agents for Diagnostics and Therapeutics. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Y064-VD39. https://resolver.caltech.edu/CaltechTHESIS:06062013-235430660