Browse by Committee Member

2024

Sanfiorenzo, Charles John (2024) Design and Construction of Bacterial Genomes at the Megabase-Scale. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/yapk-c742. https://resolver.caltech.edu/CaltechTHESIS:05312024-213823439

2023

McGehee, James Mitchell (2023) Optogenetic Approaches for Determining the Temporal Role of Morphogen Inputs on Target Gene Expression. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/c610-za20. https://resolver.caltech.edu/CaltechTHESIS:05302023-162053583

Sarma, Anish Anandsai (2023) Multicellular Control. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/kf54-fr89. https://resolver.caltech.edu/CaltechTHESIS:07052022-033543855

Wang, Sheng (2023) Synthetic Circuits for Multicellular Spatial Patterning. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/3rbk-g805. https://resolver.caltech.edu/CaltechTHESIS:06022023-192547723

2022

Beeler, Suzannah Michelle (2022) Deciphering Regulation in Escherichia coli: From Genes to Genomes. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/p3rg-m937. https://resolver.caltech.edu/CaltechTHESIS:08182021-053622635

Clamons, Samuel Eric (2022) Three Problems in the Design and Specification of Biomolecular Circuits. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/9b4h-8f95. https://resolver.caltech.edu/CaltechTHESIS:09262021-022402778

Gong, Mengsha (2022) Remodeling Jellyfish. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/pfn8-aw15. https://resolver.caltech.edu/CaltechTHESIS:01032022-225455509

Razo-Mejia, Manuel (2022) Physical Biology of Cellular Information Processing. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/kpc2-b345. https://resolver.caltech.edu/CaltechTHESIS:08242021-212609828

Su, Christina Janet (2022) Principles of Addressing Specificity in Promiscuous Ligand-Receptor Systems. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/z7dv-m192. https://resolver.caltech.edu/CaltechTHESIS:06022022-032024376

Williams, Rory Logan (2022) Development and Scaling of Differentiation Circuit Architectures for Improving the Evolutionary Stability of Burdensome Functions in E. coli. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/5k67-b636. https://resolver.caltech.edu/CaltechTHESIS:01042022-184525578

2021

Klumpe, Heidi Elizabeth (2021) Context-Dependent, Combinatorial Logic of BMP Signaling. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/3vv4-bk06. https://resolver.caltech.edu/CaltechTHESIS:05312021-221223611

2020

Brugman, Katherine Irene (2020) Pezo-1 Function in Caenorhabditis elegans. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/fz4z-c850. https://resolver.caltech.edu/CaltechTHESIS:05312020-153151158

2019

Frick, Christopher Lee (2019) How Single Cells Sense Smad3 Signal. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/WNM4-4R58. https://resolver.caltech.edu/CaltechTHESIS:05222019-160829503

Kim, Kibeom (2019) Memory and Decoding in Signaling Transduction Pathways. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/BJDQ-JX45. https://resolver.caltech.edu/CaltechTHESIS:06092019-220453694

Nunns, Harry James Rogan (2019) Linearity in Cell Signaling Pathways. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/WP0J-E945. https://resolver.caltech.edu/CaltechTHESIS:01222019-133152032

Olsman, Noah Andrew (2019) Architecture, Design, and Tradeoffs in Biomolecular Feedback Systems. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/DGPY-1679. https://resolver.caltech.edu/CaltechTHESIS:11262018-100422941

Singhal, Vipul (2019) Modeling, Computation, and Characterization to Accelerate the Development of Synthetic Gene Circuits in Cell-Free Extracts. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/g31j-ch52. https://resolver.caltech.edu/CaltechTHESIS:08262018-213846283

2018

Abrams, Michael Jacob (2018) Self-Repair and Sleep in Jellyfish. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/69br-kb59. https://resolver.caltech.edu/CaltechTHESIS:06042018-104549400

Mahmoudabadi, Gita (2018) Virology By The Numbers: A Quantitative Exploration of Viral Energetics, Genomics, and Ecology. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9Q81B91. https://resolver.caltech.edu/CaltechTHESIS:04172018-174233725

Nandagopal, Nagarajan (2018) New Capabilities of the Notch Signaling Pathway. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z98050TB. https://resolver.caltech.edu/CaltechTHESIS:12282017-140713708

Park, Jin (2018) Circuits of Dynamically Interacting Sigma Factors in Single Cells. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/CT0B-Q853. https://resolver.caltech.edu/CaltechTHESIS:12312017-234413682

Swaminathan, Anandh (2018) Application, Computation, and Theory for Synthetic Gene Circuits. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9833Q67. https://resolver.caltech.edu/CaltechTHESIS:12132017-121914940

Valencia, Jonathan Exiquio (2018) The Developmental Organization of Regulatory States in the Sea Urchin Larva. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/NVWB-AP91. https://resolver.caltech.edu/CaltechTHESIS:05292018-131620231

2017

Guo, Shaobin (2017) Prototyping Diverse Synthetic Biological Circuits in a Cell-Free Transcription-Translation System. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9CR5RDK. https://resolver.caltech.edu/CaltechTHESIS:03082017-163613964

Li, Qi Wen (2017) Biophysical Characterization of an ABC L-methionine Transporter. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9125QN9. https://resolver.caltech.edu/CaltechTHESIS:04022017-212739773

2016

Yeung, Enoch Ho-Yee (2016) Reverse Engineering and Quantifying Context Effects in Synthetic Gene Networks. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/Z9Z31WM4. https://resolver.caltech.edu/CaltechThesis:05272016-145559554

2014

LeBon, Lauren E. (2014) The Logic of Receptor-Ligand Interactions in the Notch Signaling Pathway. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/83PA-9833. https://resolver.caltech.edu/CaltechTHESIS:05212014-094412950

2012

Materna, Stefan Christian (2012) The Regulatory Origin of Oral and Aboral Mesoderm in Sea Urchin Embryos. Dissertation (Ph.D.), California Institute of Technology. doi:10.7907/77VQ-8A52. https://resolver.caltech.edu/CaltechTHESIS:05122012-162210497